Publications

Featured publications

December 8, 2025
Nature Human Behaviour

Representation in science and trust in scientists in the USA

November 20, 2025
npj Science of Food

The networks of ingredient combinations as culinary fingerprints of world cuisines

November 19, 2025
PLOS Computational Biology

Epydemix: An open-source Python package for epidemic modeling with integrated approximate Bayesian calibration

All publications

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January 19, 2022
Exploring noise, degeneracy, and determinism in biological networks with the einet package
2022
British Ecological Society
Brennan Klein, Anshuman Swain, Travis Byrum,Samuel V. Scarpino, William F. Fagan
January 14, 2022
Model-based evaluation of alternative reactive class closure strategies against COVID-19
2022
Nature Communications
Quan-Hui Liu, Juanjuan Zhang, Cheng Peng, Maria Litvinova, Shudong Huang, Piero Poletti, Filippo Trentini, Giorgio Guzzetta, Valentina Marziano, Tao Zhou, Cecile Viboud, Ana I. Bento, Jiancheng Lv, Alessandro Vespignani, Stefano Merler, Hongjie Yu & Marco Ajelli
January 14, 2022
Cost-effective proactive testing strategies during COVID-19 mass vaccination: A modelling study
2022
The Lancet Regional Health -Americas;
Zhanwei Du, Lin Wang, Yuan Bai, Xutong Wang, Abhishek Pandey, Meagan C. Fitzpatrick, Matteo Chinazzi, Ana Pastore y Piontti, Nathaniel Hupert, Michael Lachmann, Alessandro Vespignani, Alison P. Galvani, Benjamin J. Cowling, and Lauren Ancel Meyers
December 31, 2021
Engagement Outweighs Exposure to Partisan and Unreliable News within Google Search
2021
arXiv
Ronald E. Robertson, Jon Green, Damian Ruck, Katya Ognyanova, Christo Wilson, David Lazer
December 29, 2021
Correction format has a limited role when debunking misinformation
2021
Springer Link
Briony Swire-Thompson, John Cook, Lucy H. Butler, Jasmyne A. Sanderson, Stephan Lewandowsky, Ullrich K. H. Ecker
December 22, 2021
Evolution and emergence: higher order information structure in protein interactomes across the tree of life
2021
Oxford Academic
Brennan Klein, Erik Hoel, Anshuman Swain, Ross Griebenow, Michael Levin
December 2, 2021
A computational exploration of resilience and evolvability of protein–protein interaction networks
2021
Communications Biology
Brennan Klein, Ludvig Holmér, Keith M. Smith, Mackenzie M. Johnson, Anshuman Swain, Laura Stolp, Ashley I. Teufel & April S. Kleppe.
November 17, 2021
Trollfare: Russia’s Disinformation Campaign During Military Conflict in Ukraine
2021
International Journal of Communication
Larissa Doroshenko, Josephine Lukito
Social and Behavioral Dynamics
November 1, 2021
The Association Between Conventional Cancer Treatment History and Dissatisfaction Among Those Seeking Alternative Cancer Therapies: Insights From a Crowdfunding Platform
2021
International Journal of Radiation Oncology, Biology, Physics
J. Peterson, T. Wilson, J.D. Gruhl, S. Davis, J. Olsen, M.W. Parsons, B.H. Kann, M. Watt, A.S. Fagerlin, B. Swire-Thompson, S.B. Johnson
October 25, 2021
Cryptic transmission of SARS-CoV-2 and the first COVID-19 wave
2021
Nature
Jessica T. Davis, Matteo Chinazzi, Nicola Perra, Kunpeng Mu, Ana Pastore y Piontti, Marco Ajelli, Natalie E. Dean, Corrado Gioannini, Maria Litvinova, Stefano Merler, Luca Rossi, Kaiyuan Sun, Xinyue Xiong, Ira M. Longini Jr, M. Elizabeth Halloran, Cécile Viboud & Alessandro Vespignani
October 1, 2021
STRATISFIMAL LAYOUT: A modular optimization model for laying out layered node-link network visualizations
2021
IEEE Xplore
Sara di Bartolomeo; Mirek Riedewald; Wolfgang Gatterbauer; Cody Dunne
September 10, 2021
PATHATTACK: Attacking Shortest Paths in Complex Networks
2021
Springer Link
Benjamin A. Miller, Zohair Shafi, Wheeler Ruml, Yevgeniy Vorobeychik, Tina Eliassi-Rad, Scott Alfeld
August 25, 2021
The hidden influence of communities in collaborative funding of clinical science
2021
The Royal Society Publishing
Kishore Vasan, Jevin D. West
August 5, 2021
Using Administrative Records and Survey Data to Construct Samples of Tweeters and Tweets
2021
Public Opinion Quarterly
Adam G Hughes, Stefan D McCabe, William R Hobbs, Emma Remy, Sono Shah, David M J Lazer
July 22, 2021
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
2021
Science
Moritz U G Kraemer, Verity Hill, Christopher Ruis, Simon Dellicour, Sumali Bajaj, John T McCrone, Guy Baele, Kris V Parag, Anya Lindström Battle, Bernardo Gutierrez, Ben Jackson, Rachel Colquhoun, Áine O'Toole, Brennan Klein, Alessandro Vespignani, COVID-19 Genomics UK (CoG-UK) consortium; Erik Volz, Nuno R Faria, David Aanensen, Nicholas J Loman, Louis du Plessis, Simon Cauchemez, Andrew Rambaut, Samuel V Scarpino, Oliver G Pybus
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